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    Biotin/lipoate A/B protein ligase family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822541, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Biotin/lipoate A/B protein ligase family
    Primary source
    TAIR:AT3G29010
    Locus tag
    AT3G29010
    See related
    Araport:AT3G29010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (11006564..11008216)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Plant protein 1589 of unknown function Neighboring gene Calcium-binding EF-hand family protein Neighboring gene myb domain protein 110 Neighboring gene expansin A5 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein modification process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Biotin/lipoate A/B protein ligase family
    NP_189543.2
    • Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: catalytic activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin/lipoate A/B protein ligase (InterPro:IPR004143); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11006564..11008216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338998.1 → NP_001327162.1  Biotin/lipoate A/B protein ligase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRG5

    2. NM_001338999.1 → NP_001327163.1  Biotin/lipoate A/B protein ligase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH40, A0A384KW30, A0A654FBY0, Q9MBG4
      Conserved Domains (1) summary
      cd16443
      Location:14 → 216
      LplA; lipoate-protein ligase

    3. NM_001339000.1 → NP_001327164.1  Biotin/lipoate A/B protein ligase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRG7

    4. NM_113822.3 → NP_189543.2  Biotin/lipoate A/B protein ligase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189543.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH40, A0A384KW30, A0A654FBY0, Q9MBG4
      Conserved Domains (1) summary
      cd16443
      Location:14 → 216
      LplA; lipoate-protein ligase

    5. NM_001339001.1 → NP_001327165.1  Biotin/lipoate A/B protein ligase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRG5

    6. NM_001339002.1 → NP_001327166.1  Biotin/lipoate A/B protein ligase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRG5
    Nucleotide Protein
    Heading Accession and Version

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