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    hikeshi-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842922, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hikeshi-like protein
    Primary source
    TAIR:AT1G66080
    Locus tag
    AT1G66080
    See related
    Araport:AT1G66080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15E12.12; F15E12_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (24599939..24601308, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF577) Neighboring gene Translation initiation factor eIF3 subunit Neighboring gene Disease resistance protein (TIR-NBS class) Neighboring gene Plant thionin Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Glucose-Regulated HLP1 Acts as a Key Molecule in Governing Thermomemory. Sharma M, et al. Plant Physiol, 2019 Jun. PMID 30890662, Free PMC Article
    2. Functional analysis of the Hikeshi-like protein and its interaction with HSP70 in Arabidopsis. Koizumi S, et al. Biochem Biophys Res Commun, 2014 Jul 18. PMID 24942879
    3. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_105279.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sequence-specific double-stranded DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
    acts_upstream_of_or_within heat acclimation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hikeshi-like protein
    NP_176782.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF775 (InterPro:IPR008493); Has 285 Blast hits to 283 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 88; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24599939..24601308 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105279.5 → NP_176782.1  hikeshi-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176782.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W730, A0A7G2E4F1, Q9C8D7
      Conserved Domains (1) summary
      pfam05603
      Location:1 → 185
      DUF775; Protein of unknown function (DUF775)
    Nucleotide Protein
    Heading Accession and Version

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