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    PP2-A2 lectin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827729, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PP2-A2
    Official Full Name
    lectin-like protein
    Primary source
    TAIR:AT4G19850
    Locus tag
    AT4G19850
    See related
    Araport:AT4G19850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-A2; ATPP2-A2; phloem protein 2-A2; PP2A2; T16H5.210; T16H5_210
    Summary
    encodes a protein similar to phloem protein 2 in cucumber. a member of a large gene family.
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    Genomic context

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    See PP2-A2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (10776591..10777588)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Glycosyl hydrolase family protein with chitinase insertion domain-containing protein Neighboring gene FKBP-like peptidyl-prolyl cis-trans isomerase family protein Neighboring gene phloem protein 2-A1 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein phosphatase 2A holoenzyme is targeted to peroxisomes by piggybacking and positively affects peroxisomal β-oxidation. Kataya AR, et al. Plant Physiol, 2015 Feb. PMID 25489022, Free PMC Article
    2. Diversity of the superfamily of phloem lectins (phloem protein 2) in angiosperms. Dinant S, et al. Plant Physiol, 2003 Jan. PMID 12529520, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001160782.3
    NM_001341375.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    lectin-like protein
    NP_001154254.2
    • lectin-related; FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: phloem; BEST Arabidopsis thaliana protein match is: phloem protein 2-A1 (TAIR:AT4G19840.1); Has 510 Blast hits to 505 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_001320001.1
    • phloem protein 2-A2 (PP2-A2); BEST Arabidopsis thaliana protein match is: phloem protein 2-A4 (TAIR:AT1G33920.1); Has 437 Blast hits to 437 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 437; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10776591..10777588
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341376.1 → NP_001328114.1  lectin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B3N9, A0A5S9XUN8, A0A654FR19
      Conserved Domains (1) summary
      pfam14299
      Location:62 → 217
      PP2; Phloem protein 2

    2. NM_001341375.1 → NP_001320001.1  lectin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2H1ZEP0

    3. NM_001160782.3 → NP_001154254.2  lectin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154254.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XUN8, F4JTZ6
      Conserved Domains (1) summary
      pfam14299
      Location:62 → 195
      PP2; Phloem protein 2
    Nucleotide Protein
    Heading Accession and Version

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