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    phospholipase-like protein (PEARLI 4) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830013, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phospholipase-like protein (PEARLI 4) family protein
    Primary source
    TAIR:AT4G38560
    Locus tag
    AT4G38560
    See related
    Araport:AT4G38560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20M13.120; F20M13_120
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (18029196..18031333)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene ncRNA Neighboring gene phospholipase-like protein (PEARLI 4) family protein Neighboring gene ncRNA Neighboring gene Putative CDP-diacylglycerol-inositol 3-phosphatidyltransferase 2 Neighboring gene farnesylated protein 6 Neighboring gene beta-galactosidase 14 Neighboring gene HECT ubiquitin protein ligase family protein KAK

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001085043.1
    NM_120017.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phospholipase-like protein (PEARLI 4) family protein
    NP_001078512.1
    • Arabidopsis phospholipase-like protein (PEARLI 4) family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G20960.1); Has 230 Blast hits to 212 proteins in 41 species: Archae - 11; Bacteria - 15; Metazoa - 19; Fungi - 1; Plants - 163; Viruses - 2; Other Eukaryotes - 19 (source: NCBI BLink).
    NP_195568.1
    • Arabidopsis phospholipase-like protein (PEARLI 4) family; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G20960.1); Has 264 Blast hits to 246 proteins in 47 species: Archae - 11; Bacteria - 15; Metazoa - 37; Fungi - 3; Plants - 167; Viruses - 2; Other Eukaryotes - 29 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18029196..18031333
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120017.2 → NP_195568.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195568.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZS8, A0A654FWQ3, Q9SZN5
      Conserved Domains (1) summary
      pfam05278
      Location:256 → 519
      PEARLI-4; Arabidopsis phospholipase-like protein (PEARLI 4)

    2. NM_001085043.1 → NP_001078512.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078512.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZS8, A0A7G2F3W9, Q0WV01
      Conserved Domains (1) summary
      pfam05278
      Location:256 → 521
      PEARLI-4; Arabidopsis phospholipase-like protein (PEARLI 4)
    Nucleotide Protein
    Heading Accession and Version

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