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    Xanthine/uracil permease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836409, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Xanthine/uracil permease family protein
    Primary source
    TAIR:AT5G62890
    Locus tag
    AT5G62890
    See related
    Araport:AT5G62890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQB2.190; MQB2_190
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (25243148..25247377)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RAC-like 10 Neighboring gene ncRNA Neighboring gene basic-leucine zipper transcription factor K Neighboring gene RING/U-box superfamily protein Neighboring gene response regulator 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
    2. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
    3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    4. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001037050.2
    NM_001085313.2
    NM_125683.4
    NM_180920.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 
    located_in plasmodesma HDA PubMed 
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Xanthine/uracil permease family protein
    NP_001032127.2
    • Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9339 Blast hits to 9322 proteins in 1919 species: Archae - 67; Bacteria - 7633; Metazoa - 348; Fungi - 130; Plants - 461; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink).
    NP_001078782.1
    • Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9225 Blast hits to 9208 proteins in 1898 species: Archae - 67; Bacteria - 7527; Metazoa - 347; Fungi - 130; Plants - 454; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink).
    NP_201094.1
    • Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: cell wall, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9339 Blast hits to 9322 proteins in 1919 species: Archae - 67; Bacteria - 7633; Metazoa - 348; Fungi - 130; Plants - 461; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink).
    NP_851251.2
    • Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: cell wall, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G49990.1); Has 9339 Blast hits to 9322 proteins in 1919 species: Archae - 67; Bacteria - 7633; Metazoa - 348; Fungi - 130; Plants - 461; Viruses - 1; Other Eukaryotes - 699 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25243148..25247377
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125683.4 → NP_201094.1  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201094.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q27GI3, Q3E869, Q94CA7, Q9FM07
      UniProtKB/TrEMBL
      A0A178UJX3, A0A5S9YH56, A0A7G2FIC8
      Conserved Domains (1) summary
      cl23746
      Location:37 → 442
      Xan_ur_permease; Permease family

    2. NM_001085313.2 → NP_001078782.1  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078782.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FIC8, B9DF96
      Conserved Domains (2) summary
      pfam00860
      Location:37 → 442
      Xan_ur_permease; Permease family
      cl23746
      Location:33 → 447
      HCO3_cotransp; HCO3- transporter family

    3. NM_001037050.2 → NP_001032127.2  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032127.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q27GI3, Q3E869, Q94CA7, Q9FM07
      UniProtKB/TrEMBL
      A0A178UJX3, A0A5S9YH56, A0A7G2FIC8
      Conserved Domains (1) summary
      cl23746
      Location:37 → 442
      Xan_ur_permease; Permease family

    4. NM_180920.3 → NP_851251.2  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851251.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q27GI3, Q3E869, Q94CA7, Q9FM07
      UniProtKB/TrEMBL
      A0A178UJX3, A0A5S9YH56, A0A7G2FIC8
      Conserved Domains (1) summary
      cl23746
      Location:37 → 442
      Xan_ur_permease; Permease family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q27GI3.2

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