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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009224.3 RefSeqGene
- Range
-
5002..681377
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001166247.1 → NP_001159719.1 glutamate receptor ionotropic, kainate 2 isoform 3 precursor
See identical proteins and their annotated locations for NP_001159719.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an additional exon in the 3' coding region, compared to transcript variant 1. The resulting isoform (3) is shorter and has a distinct C-terminus compared to isoform 1. RNA editing changes Ile567Val, Tyr571Cys and Gln621Arg.
- Source sequence(s)
-
AJ252246, AP002530, BC037954
- Consensus CDS
-
CCDS55045.1
- UniProtKB/TrEMBL
-
A0A804HKP5
- Related
- ENSP00000358134.1, ENST00000369138.5
- Conserved Domains (2) summary
-
- cd06382
Location:37 → 414
- PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
- cl21456
Location:430 → 800
- Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
-
NM_021956.5 → NP_068775.1 glutamate receptor ionotropic, kainate 2 isoform 1 precursor
See identical proteins and their annotated locations for NP_068775.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1). RNA editing changes Ile567Val, Tyr571Cys and Gln621Arg.
- Source sequence(s)
-
AP002528, AP002529, AP002530
- Consensus CDS
-
CCDS5048.1
- UniProtKB/Swiss-Prot
- A6NMY9, B5MCV0, D7RWZ3, D7RWZ4, D7RWZ5, D7RWZ6, D7RWZ7, Q13002, Q8WWS1, Q96KS6, Q96KS7, Q96KS8
- UniProtKB/TrEMBL
- A0A8D9PH75, A8K0H7
- Related
- ENSP00000358130.6, ENST00000369134.9
- Conserved Domains (2) summary
-
- cd06382
Location:37 → 414
- PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
- cl21456
Location:430 → 800
- Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
-
NM_175768.3 → NP_786944.1 glutamate receptor ionotropic, kainate 2 isoform 2 precursor
See identical proteins and their annotated locations for NP_786944.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an additional exon in the 3' coding region, compared to transcript variant 1. The resulting isoform (2) is shorter and has a distinct C-terminus compared to isoform 1. RNA editing changes Ile567Val, Tyr571Cys and Gln621Arg.
- Source sequence(s)
-
AJ301610, AK289542, AP002530, BC037954
- Consensus CDS
-
CCDS5049.1
- UniProtKB/TrEMBL
-
A0A804HKP5
- Related
- ENSP00000405596.1, ENST00000413795.5
- Conserved Domains (2) summary
-
- cd06382
Location:37 → 414
- PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
- cl21456
Location:430 → 800
- Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
101393708..102070083
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047418681.1 → XP_047274637.1 glutamate receptor ionotropic, kainate 2 isoform X1
- UniProtKB/Swiss-Prot
- A6NMY9, B5MCV0, D7RWZ3, D7RWZ4, D7RWZ5, D7RWZ6, D7RWZ7, Q13002, Q8WWS1, Q96KS6, Q96KS7, Q96KS8
- UniProtKB/TrEMBL
- A0A8D9PH75, A8K0H7
-
XM_047418682.1 → XP_047274638.1 glutamate receptor ionotropic, kainate 2 isoform X2
- UniProtKB/TrEMBL
-
A0A804HKP5
-
XM_017010781.3 → XP_016866270.1 glutamate receptor ionotropic, kainate 2 isoform X4
- UniProtKB/TrEMBL
-
A0A804HI04
- Related
- ENSP00000506840.1, ENST00000682222.1
- Conserved Domains (2) summary
-
- cd06382
Location:37 → 414
- PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
- cl21456
Location:430 → 702
- Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
-
XM_017010782.3 → XP_016866271.1 glutamate receptor ionotropic, kainate 2 isoform X5
- UniProtKB/TrEMBL
-
A8K7F0
- Related
- ENSP00000508069.1, ENST00000682115.1
-
XM_005266946.5 → XP_005267003.1 glutamate receptor ionotropic, kainate 2 isoform X3
See identical proteins and their annotated locations for XP_005267003.1
- UniProtKB/TrEMBL
-
B7Z8P6
- Conserved Domains (2) summary
-
- cd06382
Location:1 → 365
- PBP1_iGluR_Kainate; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the kainate receptors
- cl21456
Location:381 → 751
- Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
102567441..103245122
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054355243.1 → XP_054211218.1 glutamate receptor ionotropic, kainate 2 isoform X1
- UniProtKB/Swiss-Prot
- A6NMY9, B5MCV0, D7RWZ3, D7RWZ4, D7RWZ5, D7RWZ6, D7RWZ7, Q13002, Q8WWS1, Q96KS6, Q96KS7, Q96KS8
- UniProtKB/TrEMBL
- A0A8D9PH75, A8K0H7
-
XM_054355244.1 → XP_054211219.1 glutamate receptor ionotropic, kainate 2 isoform X2
- UniProtKB/TrEMBL
-
A0A804HKP5
-
XM_054355246.1 → XP_054211221.1 glutamate receptor ionotropic, kainate 2 isoform X4
- UniProtKB/TrEMBL
-
A0A804HI04
-
XM_054355247.1 → XP_054211222.1 glutamate receptor ionotropic, kainate 2 isoform X5
- UniProtKB/TrEMBL
-
A8K7F0
-
XM_054355245.1 → XP_054211220.1 glutamate receptor ionotropic, kainate 2 isoform X3
- UniProtKB/TrEMBL
-
B7Z8P6