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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008885.1 RefSeqGene
- Range
-
5017..105983
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001160227.2 → NP_001153699.1 spatacsin isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two alternate in-frame exons in the 3' coding region, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
BC094704, BC150640
- Consensus CDS
-
CCDS53939.1
- UniProtKB/TrEMBL
-
H0YLK7
- Related
- ENSP00000445278.2, ENST00000535302.6
- Conserved Domains (1) summary
-
- pfam14649
Location:1982 → 2274
- Spatacsin_C; Spatacsin C-terminus
-
NM_001411132.1 → NP_001398061.1 spatacsin isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC009996
- Consensus CDS
-
CCDS91991.1
- UniProtKB/TrEMBL
- A0A804HID9, C4B7M4
- Related
- ENSP00000507025.1, ENST00000682065.1
-
NM_025137.4 → NP_079413.3 spatacsin isoform 1
See identical proteins and their annotated locations for NP_079413.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AB058743, AC009996, BC094704
- Consensus CDS
-
CCDS10112.1
- UniProtKB/Swiss-Prot
- A8KAX9, B9EK60, F5H3N6, Q4VC11, Q58G86, Q69YG6, Q6NW01, Q8N270, Q8TBU9, Q96JI7, Q9H734
- UniProtKB/TrEMBL
-
C4B7M4
- Related
- ENSP00000261866.7, ENST00000261866.12
- Conserved Domains (1) summary
-
- pfam14649
Location:2095 → 2387
- Spatacsin_C; Spatacsin C-terminus