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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838279, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G17090
    Locus tag
    AT1G17090
    See related
    Araport:AT1G17090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20D23.31; F20D23_31
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (5842168..5844367, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein Neighboring gene Ribosomal protein L18ae family Neighboring gene SOUL heme-binding family protein Neighboring gene ubiquitin-specific protease 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001160874.2
    NM_001332277.1
    NM_001332278.1
    NM_001332279.1
    NM_101569.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001154346.1
    • unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_001319025.1
    • unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5842168..5844367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001160874.2 → NP_001154346.1  uncharacterized protein AT1G17090 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154346.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIS9, A0A384LMH3, Q93Z61

    2. NM_001332277.1 → NP_001319025.1  uncharacterized protein AT1G17090 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIS9, A0A384LMH3, Q93Z61

    3. NM_001332278.1 → NP_001322670.1  uncharacterized protein AT1G17090 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIS9, A0A384LMH3, Q93Z61

    4. NM_101569.3 → NP_173152.1  uncharacterized protein AT1G17090 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173152.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIS9, A0A384LMH3, Q93Z61

    5. NM_001332279.1 → NP_001322671.1  uncharacterized protein AT1G17090 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIS9, A0A384LMH3, Q93Z61
    Nucleotide Protein
    Heading Accession and Version

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