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    Nuclear transport factor 2 (NTF2) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843489, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nuclear transport factor 2 (NTF2) family protein
    Primary source
    TAIR:AT1G71480
    Locus tag
    AT1G71480
    See related
    Araport:AT1G71480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26A9.14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (26931852..26933313)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA Neighboring gene Rieske (2Fe-2S) domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131
    2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001334499.1
    NM_001334500.1
    NM_105817.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast thylakoid membrane HDA PubMed 

    General protein information

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    Preferred Names
    Nuclear transport factor 2 (NTF2) family protein
    NP_177304.1
    • Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: transport, protein import into nucleus; LOCATED IN: chloroplast thylakoid membrane, intracellular, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G41470.1); Has 98 Blast hits to 98 proteins in 29 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26931852..26933313
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105817.3 → NP_177304.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177304.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBD8, A0A654EN51, Q9C9I5
      Conserved Domains (1) summary
      pfam02136
      Location:71 → 192
      NTF2; Nuclear transport factor 2 (NTF2) domain

    2. NM_001334499.1 → NP_001321581.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARB4

    3. NM_001334500.1 → NP_001321582.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBD8, A0A1P8ARE9
    Nucleotide Protein
    Heading Accession and Version

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