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    PDLP4 plasmodesmata-located protein 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819592, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PDLP4
    Official Full Name
    plasmodesmata-located protein 4
    Primary source
    TAIR:AT3G04370
    Locus tag
    AT3G04370
    See related
    Araport:AT3G04370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    plasmodesmata-located protein 4; T27C4.1; T27C4_1
    Summary
    Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.
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    Genomic context

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    See PDLP4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (1159409..1161338)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene vacuolar sorting-associated protein (DUF946) Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene SET-domain containing protein lysine methyltransferase family protein Neighboring gene Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Specific targeting of a plasmodesmal protein affecting cell-to-cell communication. Thomas CL, et al. PLoS Biol, 2008 Jan. PMID 18215111, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001035554.2
    NM_111308.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plasmodesmata-located protein 4
    NP_001030631.1
    • plasmodesmata-located protein 4 (PDLP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 2 (TAIR:AT1G04520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_187087.2
    • plasmodesmata-located protein 4 (PDLP4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 3 (TAIR:AT2G33330.1); Has 317 Blast hits to 313 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 317; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1159409..1161338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111308.3 → NP_187087.2  plasmodesmata-located protein 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187087.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6E263, Q6E264, Q9M849, Q9M8Z3
      UniProtKB/TrEMBL
      A0A7G2EJY2
      Conserved Domains (1) summary
      pfam01657
      Location:54 → 142
      Stress-antifung; Salt stress response/antifungal

    2. NM_001035554.2 → NP_001030631.1  plasmodesmata-located protein 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030631.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EMB2
      Conserved Domains (1) summary
      pfam01657
      Location:54 → 142
      Stress-antifung; Salt stress response/antifungal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6E263.2

    Gene LinkOut

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