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    histone-lysine N-methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822300, updated on 18-Sep-2024

    Summary

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    Official Full Name
    histone-lysine N-methyltransferase
    Primary source
    TAIR:AT3G26850
    Locus tag
    AT3G26850
    See related
    Araport:AT3G26850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (9895542..9898006, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Esterase/lipase/thioesterase family protein Neighboring gene ncRNA Neighboring gene Cytochrome P450 superfamily protein Neighboring gene Esterase/lipase/thioesterase family protein Neighboring gene RNA-directed DNA polymerase (reverse transcriptase)-related family protein Neighboring gene Plant self-incompatibility protein S1 family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_113597.3
    NM_202639.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    histone-lysine N-methyltransferase
    NP_566802.1
    • histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 88; Viruses - 5; Other Eukaryotes - 14 (source: NCBI BLink).
    NP_974368.1
    • histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9895542..9898006 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202639.1 → NP_974368.1  histone-lysine N-methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974368.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEF0, A0A384KD36, A0A654FHZ1, Q9LW25
      Conserved Domains (1) summary
      PLN02976
      Location:155 → 263
      PLN02976; amine oxidase

    2. NM_113597.3 → NP_566802.1  histone-lysine N-methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566802.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEF0, A0A384KD36, A0A654FHZ1, Q9LW25
      Conserved Domains (1) summary
      PLN02976
      Location:155 → 263
      PLN02976; amine oxidase
    Nucleotide Protein
    Heading Accession and Version

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