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    XIH Myosin family protein with Dil domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828991, updated on 18-Sep-2024

    Summary

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    Official Symbol
    XIH
    Official Full Name
    Myosin family protein with Dil domain-containing protein
    Primary source
    TAIR:AT4G28710
    Locus tag
    AT4G28710
    See related
    Araport:AT4G28710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATXIH; F16A16.180; F16A16_180; MYOSIN XI H
    Summary
    member of Myosin-like proteins
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    Genomic context

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    See XIH in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    39
    Sequence:
    Chromosome: 4; NC_003075.7 (14171998..14182168)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ammonium transporter 1;4 Neighboring gene RmlC-like cupins superfamily protein Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene Flavin-binding monooxygenase family protein Neighboring gene LOW PSII ACCUMULATION-like protein Neighboring gene Glutaredoxin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence. Reddy AS, et al. Genome Biol, 2001. PMID 11516337, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119015.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cytoskeletal motor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within actin filament-based movement TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Myosin family protein with Dil domain-containing protein
    NP_194600.2
    • XIH; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G43900.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14171998..14182168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119015.4 → NP_194600.2  Myosin family protein with Dil domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194600.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JM19, Q9M0G3, Q9SVT9
      UniProtKB/TrEMBL
      A0A178V040
      Conserved Domains (7) summary
      smart00242
      Location:56 → 738
      MYSc; Myosin. Large ATPases
      cd15475
      Location:1109 → 1486
      MyosinXI_CBD; cargo binding domain of myosin XI
      cd01384
      Location:75 → 726
      MYSc_Myo11; class XI myosin, motor domain
      pfam01442
      Location:893 → 1041
      Apolipoprotein; Apolipoprotein A1/A4/E domain
      pfam02736
      Location:12 → 47
      Myosin_N; Myosin N-terminal SH3-like domain
      pfam10211
      Location:978 → 1023
      Ax_dynein_light; Axonemal dynein light chain
      pfam14265
      Location:893 → 1011
      DUF4355; Domain of unknown function (DUF4355)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JM19.1

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