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    ANK6 Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836244, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ANK6
    Official Full Name
    Ankyrin repeat family protein
    Primary source
    TAIR:AT5G61230
    Locus tag
    AT5G61230
    See related
    Araport:AT5G61230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ankyrin repeat protein 6; MAF19.22; MAF19_22; phytochrome interacting ankyrin-repeat protein 2; PIA2
    Summary
    Encodes ANK6, a mitochondrial ankyrin repeat protein required for male-female gamete recognition.
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    Genomic context

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    See ANK6 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (24627187..24628968)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene soluble N-ethylmaleimide-sensitive factor adaptor protein 33 Neighboring gene ncRNA Neighboring gene LYR family of Fe/S cluster biogenesis protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene glucuronidase 1 Neighboring gene Plant calmodulin-binding protein-like protein Neighboring gene phytochrome-interacting factor7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An ankyrin repeat protein is involved in anthocyanin biosynthesis in Arabidopsis. Yoo J, et al. Physiol Plant, 2011 Aug. PMID 21395597
    2. RPS9M, a Mitochondrial Ribosomal Protein, Is Essential for Central Cell Maturation and Endosperm Development in Arabidopsis. Lu C, et al. Front Plant Sci, 2017. PMID 29312411, Free PMC Article
    3. ANK6, a mitochondrial ankyrin repeat protein, is required for male-female gamete recognition in Arabidopsis thaliana. Yu F, et al. Proc Natl Acad Sci U S A, 2010 Dec 21. PMID 21123745, Free PMC Article
    4. Phytochrome-interacting ankyrin repeat protein 2 modulates phytochrome A-mediated PIF3 phosphorylation in light signal transduction. Yoo J, et al. J Biochem, 2016 Oct. PMID 27143545
    5. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results suggest that PIA2 modulates phyA-mediated PIF3 phosphorylation by physical interaction with PIF3 and that the secondary structure of the PIA2 N-terminus is important in this modulation.
      Title: Phytochrome-interacting ankyrin repeat protein 2 modulates phytochrome A-mediated PIF3 phosphorylation in light signal transduction.
    2. PIA2 interacts with and is phosphorylated by phytochrome A. PIA2 functions in the regulation of anthocyanin biosynthesis in Arabidopsis. [PIA2]
      Title: An ankyrin repeat protein is involved in anthocyanin biosynthesis in Arabidopsis.
    3. ANK6 plays a central role in male-female gamete recognition, possibly by regulating mitochondrial gene expression.
      Title: ANK6, a mitochondrial ankyrin repeat protein, is required for male-female gamete recognition in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Miscellaneous features

    • Loc: 24627892-24628017 AT5G61230.uORF1
    NM_125516.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phytochrome binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phytochrome binding IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within double fertilization forming a zygote and endosperm IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo sac development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within male-female gamete recognition during double fertilization forming a zygote and endosperm IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in negative regulation of protein phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of anthocyanin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to far red light IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to high light intensity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to sucrose IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ankyrin repeat family protein
    NP_200931.1
    • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G07840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24627187..24628968
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125516.4 → NP_200931.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200931.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FNP4
      UniProtKB/TrEMBL
      A0A178UBU8, A0A5S9YGP0
      Conserved Domains (2) summary
      sd00045
      Location:28 → 59
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:33 → 125
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FNP4.1

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