Oxidoreductase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Oxidoreductase family protein
Primary source: TAIR:AT4G17370
Locus tag: AT4G17370
See related: Araport:AT4G17370
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: DL4720W; FCAALL.420
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 7

Sequence:: Chromosome: 4; NC_003075.7 (9705845..9708342)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001341218.1

Supported by ESTs:

NM_117841.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables nucleotide binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in extracellular region	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Oxidoreductase family protein

NP_193468.2

Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 13319 Blast hits to 13319 proteins in 1855 species: Archae - 262; Bacteria - 9244; Metazoa - 179; Fungi - 353; Plants - 43; Viruses - 0; Other Eukaryotes - 3238 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

9705845..9708342

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_117841.4 → NP_193468.2 Oxidoreductase family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_193468.2

Status: REVIEWED

UniProtKB/TrEMBL

A0A178UTZ7, O23580, Q66GR2

Conserved Domains (1) summary

COG0673
Location:11 → 366

MviM; Predicted dehydrogenase [General function prediction only]
NM_001341218.1 → NP_001329410.1 Oxidoreductase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B7N8

Conserved Domains (1) summary

pfam02894
Location:69 → 282

GFO_IDH_MocA_C; Oxidoreductase family, C-terminal alpha/beta domain