U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PNMA6A PNMA family member 6A [ Homo sapiens (human) ]

    Gene ID: 84968, updated on 10-Dec-2024

    Summary

    Official Symbol
    PNMA6Aprovided by HGNC
    Official Full Name
    PNMA family member 6Aprovided by HGNC
    Primary source
    HGNC:HGNC:28248
    See related
    Ensembl:ENSG00000235961 MIM:300917; AllianceGenome:HGNC:28248
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MA6; PNMA6; PNMA6C
    Expression
    Biased expression in brain (RPKM 8.1), kidney (RPKM 5.5) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See PNMA6A in Genome Data Viewer
    Location:
    Xq28
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (153072454..153075019)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (151340002..151341966)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (152338299..152340864)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 48 Neighboring gene PNMA family member 3 Neighboring gene PNMA family member 6B (pseudogene) Neighboring gene uncharacterized LOC124905225

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    paraneoplastic antigen-like protein 6A
    Names
    paraneoplastic Ma antigen family member 6A
    paraneoplastic Ma antigen family member 6C
    paraneoplastic antigen-like 6A related protein
    paraneoplastic antigen-like protein 6C

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016372.2 RefSeqGene

      Range
      4983..7548
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_032882.6NP_116271.3  paraneoplastic antigen-like protein 6A

      See identical proteins and their annotated locations for NP_116271.3

      Status: VALIDATED

      Source sequence(s)
      AC243374, AC243428
      Consensus CDS
      CCDS14719.1
      UniProtKB/Swiss-Prot
      A8K1G4, D3DWT8, P0CW24, P0CW26, Q96A40
      Related
      ENSP00000391488.3, ENST00000421798.5
      Conserved Domains (1) summary
      pfam14893
      Location:1318
      PNMA; PNMA

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      153072454..153075019
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      151340002..151341966
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)