Fam83f family with sequence similarity 83, member F [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Fam83fprovided by RGD
Official Full Name: family with sequence similarity 83, member Fprovided by RGD
Primary source: RGD:1562089
See related: EnsemblRapid:ENSRNOG00000018330 AllianceGenome:RGD:1562089
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1562089
Summary: Predicted to enable protein kinase binding activity. Predicted to be involved in signal transduction. Orthologous to human FAM83F (family with sequence similarity 83 member F). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Kidney (RPKM 26.2), Testes (RPKM 14.9) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 7q34

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	7	NC_086025.1 (114091356..114120640)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	7	NC_051342.1 (112211164..112240454)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	7	NC_005106.4 (121889157..121918772)

Chromosome 7 - NC_086025.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables protein kinase binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in signal transduction	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: protein FAM83F

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001130502.1 → NP_001123974.1 protein FAM83F

See identical proteins and their annotated locations for NP_001123974.1

Status: PROVISIONAL

Source sequence(s)

CH473950

UniProtKB/TrEMBL

A6HSX5, D3ZAT7

Related

ENSRNOP00000024835.4, ENSRNOT00000024835.7

Conserved Domains (2) summary

cd09186
Location:20 → 291

PLDc_FAM83F_N; N-terminal phospholipase D-like domain of the uncharacterized protein, Family with sequence similarity 83F

pfam13091
Location:150 → 287

PLDc_2; PLD-like domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086025.1 Reference GRCr8

Range

114091356..114120640

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_039079276.1 → XP_038935204.1 protein FAM83F isoform X1

Conserved Domains (1) summary

cl15239
Location:35 → 169

PLDc_SF; Catalytic domain of phospholipase D superfamily proteins