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    Smr3a submaxillary gland androgen regulated protein 3A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498341, updated on 9-Dec-2024

    Summary

    Official Symbol
    Smr3aprovided by RGD
    Official Full Name
    submaxillary gland androgen regulated protein 3Aprovided by RGD
    Primary source
    RGD:1563299
    See related
    EnsemblRapid:ENSRNOG00000001949 AllianceGenome:RGD:1563299
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Vcsb1; PR-Vbeta1; VCS-beta1
    Summary
    Predicted to enable endopeptidase inhibitor activity. Predicted to be involved in regulation of sensory perception of pain. Predicted to be located in extracellular region. Orthologous to human SMR3A (submaxillary gland androgen regulated protein 3A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 3.6) See more
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    Genomic context

    See Smr3a in Genome Data Viewer
    Location:
    14p22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (20332951..20338820, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (20053779..20059568, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (21703336..21709074, complement)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene SMR1 protein-like Neighboring gene uncharacterized LOC134481832 Neighboring gene peptidylprolyl isomerase D, pseudogene 14 Neighboring gene calcium binding protein, spermatid associated 1

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables endopeptidase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of sensory perception of pain IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    submaxillary gland androgen-regulated protein 3A
    Names
    submaxillary gland androgen regulated protein 3 homolog A
    variable coding sequence B1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017497.1NP_001017497.1  submaxillary gland androgen-regulated protein 3A precursor

      See identical proteins and their annotated locations for NP_001017497.1

      Status: PROVISIONAL

      Source sequence(s)
      X77816
      UniProtKB/TrEMBL
      F1M9B8, Q64371
      Related
      ENSRNOP00000002669.2, ENSRNOT00000002669.4
      Conserved Domains (1) summary
      pfam15621
      Location:125
      PROL5-SMR; Proline-rich submaxillary gland androgen-regulated family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      20332951..20338820 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063273460.1XP_063129530.1  submaxillary gland androgen-regulated protein 3A isoform X1