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    Zinc-finger domain of monoamine-oxidase A repressor R1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816885, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Zinc-finger domain of monoamine-oxidase A repressor R1
    Primary source
    TAIR:AT2G23530
    Locus tag
    AT2G23530
    See related
    Araport:AT2G23530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26B6.18; F26B6_18
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (10020461..10022947, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene spermidine disinapoyl acyltransferase Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene methyl esterase 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_127917.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Zinc-finger domain of monoamine-oxidase A repressor R1
    NP_179934.2
    • Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10020461..10022947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127917.3 → NP_179934.2  Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179934.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VX23, A0A654EVF5, Q1PF11
      Conserved Domains (1) summary
      pfam10497
      Location:161 → 253
      zf-4CXXC_R1; Zinc-finger domain of monoamine-oxidase A repressor R1
    Nucleotide Protein
    Heading Accession and Version

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