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    RNA-dependent RNA polymerase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816512, updated on 18-Sep-2024

    Summary

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    Official Full Name
    RNA-dependent RNA polymerase family protein
    Primary source
    TAIR:AT2G19930
    Locus tag
    AT2G19930
    See related
    Araport:AT2G19930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6F22.4; F6F22_4
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    18
    Sequence:
    Chromosome: 2; NC_003071.7 (8607340..8612648, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RNA-dependent RNA polymerase family protein Neighboring gene RNA-dependent RNA polymerase family protein Neighboring gene Putative N-acetyl-gamma-glutamyl-phosphate reductase Neighboring gene golgin Putative 1 Neighboring gene hAT family dimerization domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127551.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA-dependent RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RNA-dependent RNA polymerase family protein
    NP_179583.3
    • RNA-dependent RNA polymerase family protein; FUNCTIONS IN: RNA-directed RNA polymerase activity; INVOLVED IN: posttranscriptional gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase family protein (TAIR:AT2G19910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8607340..8612648 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335651.1 → NP_001325339.1  RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2V9, A0A5S9WZL6, A0A654F549
      Conserved Domains (1) summary
      pfam05183
      Location:223 → 834
      RdRP; RNA dependent RNA polymerase

    2. NM_001335652.1 → NP_001325338.1  RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2V4, A0A654F549

    3. NM_127551.4 → NP_179583.3  RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179583.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82188, Q0WNQ6
      UniProtKB/TrEMBL
      A0A654F549
      Conserved Domains (1) summary
      pfam05183
      Location:224 → 790
      RdRP; RNA dependent RNA polymerase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82188.2

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