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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819267, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT2G46550
    Locus tag
    AT2G46550
    See related
    Araport:AT2G46550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13A10.8
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (19111961..19114227, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene auxin response factor 11 Neighboring gene uncharacterized protein Neighboring gene fiber Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene laccase 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    • At2g46550_Arabidopsis_lyrata_ssp._lyrata_CAN10 (e-PCR)
    • At2g46550_Arabidopsis_lyrata_ssp._petraea_GER10 (e-PCR)
    NM_001202834.1
    NM_001337201.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001189763.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3).
    NP_566080.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19111961..19114227 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130220.3 → NP_566080.1  uncharacterized protein AT2G46550 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566080.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VP44, A0A7G2EE74, Q8L732, Q8LFB0, Q9ZPY4

    2. NM_001202834.1 → NP_001189763.1  uncharacterized protein AT2G46550 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189763.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IJ67

    3. NM_001337201.1 → NP_001324891.1  uncharacterized protein AT2G46550 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B1K1, B9DHY8
    Nucleotide Protein
    Heading Accession and Version

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