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    PE11 pectinesterase 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816699, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PE11
    Official Full Name
    pectinesterase 11
    Primary source
    TAIR:AT2G21610
    Locus tag
    AT2G21610
    See related
    Araport:AT2G21610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A. THALIANA PECTINESTERASE 11; ATPE11; F2G1.12; F2G1_12; pectinesterase 11
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    Genomic context

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    See PE11 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (9245038..9247052, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Glucose-1-phosphate adenylyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene endoplasmatic reticulum retrieval protein 1B Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene Sec23/Sec24 protein transport family protein Neighboring gene marker for oxidative stress response protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables pectinesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall modification IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in pectin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    pectinesterase 11
    NP_179755.1
    • pectinesterase 11 (PE11); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: N-terminal protein myristoylation, cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 2459 Blast hits to 2412 proteins in 316 species: Archae - 8; Bacteria - 608; Metazoa - 1; Fungi - 201; Plants - 1615; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9245038..9247052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127732.2 → NP_179755.1  pectinesterase 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179755.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SIJ9
      UniProtKB/TrEMBL
      A0A5S9WZZ1, A0A654EUX2
      Conserved Domains (1) summary
      PLN02432
      Location:47 → 333
      PLN02432; putative pectinesterase

    2. NM_001335771.1 → NP_001324138.1  pectinesterase 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W118, A0A1P8AZ45, A0A384LB06, A0A5S9WZZ1, A0A654EUX2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SIJ9.1

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