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    HXXXD-type acyl-transferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839768, updated on 18-Sep-2024

    Summary

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    Official Full Name
    HXXXD-type acyl-transferase family protein
    Primary source
    TAIR:AT1G28680
    Locus tag
    AT1G28680
    See related
    Araport:AT1G28680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1K23.12; F1K23_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (10078189..10079909)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene ncRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Nucleotide-diphospho-sugar transferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. COSY catalyses trans-cis isomerization and lactonization in the biosynthesis of coumarins. Vanholme R, et al. Nat Plants, 2019 Oct. PMID 31501530
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Coumarin synthase (COSY) has an essential function in the biosynthesis of coumarins
      Title: COSY catalyses trans-cis isomerization and lactonization in the biosynthesis of coumarins.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001332822.1
    NM_102635.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within coumarin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    HXXXD-type acyl-transferase family protein
    NP_174189.1
    • HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07080.1); Has 2577 Blast hits to 2568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 64; Plants - 2509; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10078189..10079909
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102635.3 → NP_174189.1  HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174189.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKU1, Q0WWS1, Q8LF28
      Conserved Domains (1) summary
      cl23789
      Location:27 → 441
      PLN02481; Omega-hydroxypalmitate O-feruloyl transferase

    2. NM_001332822.1 → NP_001322183.1  HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AT84, Q0WWS1
      Conserved Domains (1) summary
      cl23789
      Location:27 → 353
      PLN02481; Omega-hydroxypalmitate O-feruloyl transferase
    Nucleotide Protein
    Heading Accession and Version

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