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    MICOS complex subunit Mic10-like protein (DUF543) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838858, updated on 18-Sep-2024

    Summary

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    Official Full Name
    MICOS complex subunit Mic10-like protein (DUF543)
    Primary source
    TAIR:AT1G22520
    Locus tag
    AT1G22520
    See related
    Araport:AT1G22520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12K8.27; F12K8_27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (7952974..7954546, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) Neighboring gene ncRNA Neighboring gene PATELLIN 2 Neighboring gene Major facilitator superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtMic60 Is Involved in Plant Mitochondria Lipid Trafficking and Is Part of a Large Complex. Michaud M, et al. Curr Biol, 2016 Mar 7. PMID 26898467, Free PMC Article
    2. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001160885.1
    NM_102101.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    part_of MICOS complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of inner mitochondrial membrane protein complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    MICOS complex subunit Mic10-like protein (DUF543)
    NP_001154357.1
    • Domain of unknown function (DUF543); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G72170.1); Has 115 Blast hits to 115 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 7; Plants - 57; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
    NP_564173.1
    • Domain of unknown function (DUF543); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G72170.1); Has 107 Blast hits to 107 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7952974..7954546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102101.4 → NP_564173.1  MICOS complex subunit Mic10-like protein (DUF543) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564173.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XY2, Q8LAJ9
      UniProtKB/TrEMBL
      A0A178WKB7, A0A7G2DYQ6
      Conserved Domains (1) summary
      pfam04418
      Location:8 → 73
      DUF543; Domain of unknown function (DUF543)

    2. NM_001160885.1 → NP_001154357.1  MICOS complex subunit Mic10-like protein (DUF543) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154357.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I1E5
      Conserved Domains (1) summary
      pfam04418
      Location:1 → 73
      DUF543; Domain of unknown function (DUF543)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LAJ9.1

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