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    DHHC-type zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843274, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DHHC-type zinc finger family protein
    Primary source
    TAIR:AT1G69420
    Locus tag
    AT1G69420
    See related
    Araport:AT1G69420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10D13.9; F10D13_9
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (26093026..26097167)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene homologue of bacterial MinE 1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene eukaryotic elongation factor 5A-3 Neighboring gene Son of sevenless protein Neighboring gene Argonaute family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis protein S-acyl transferases positively mediate BR signaling through S-acylation of BSK1. Liu F, et al. Proc Natl Acad Sci U S A, 2024 Feb 13. PMID 38315835, Free PMC Article
    2. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_105609.4
    NM_202385.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein-cysteine S-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in early endosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in trans-Golgi network IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DHHC-type zinc finger family protein
    NP_177101.2
    • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4875 Blast hits to 4868 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2148; Fungi - 657; Plants - 848; Viruses - 0; Other Eukaryotes - 1222 (source: NCBI BLink).
    NP_974114.1
    • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26093026..26097167
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105609.4 → NP_177101.2  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177101.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C533
      UniProtKB/TrEMBL
      A0A178WF77, A0A5S9WTC4, A0A654EY63
      Conserved Domains (1) summary
      pfam01529
      Location:164 → 296
      DHHC; DHHC palmitoyltransferase

    2. NM_202385.2 → NP_974114.1  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974114.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C533
      UniProtKB/TrEMBL
      A0A178WF77, A0A5S9WTC4, A0A654EY63
      Conserved Domains (1) summary
      pfam01529
      Location:164 → 296
      DHHC; DHHC palmitoyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C533.2

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