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    LYK2 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820047, updated on 18-Sep-2024

    Summary

    Official Symbol
    LYK2
    Official Full Name
    Protein kinase superfamily protein
    Primary source
    TAIR:AT3G01840
    Locus tag
    AT3G01840
    See related
    Araport:AT3G01840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28J7.37; F28J7_37; LysM-containing receptor-like kinase 2
    Summary
    Encodes a LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.
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    Genomic context

    See LYK2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (296582..298648, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene Calcium-binding EF-hand family protein Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene uncharacterized protein

    General gene information

    NM_111050.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Protein kinase superfamily protein
    NP_186833.1
    • Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 52720 Blast hits to 52395 proteins in 2921 species: Archae - 39; Bacteria - 3156; Metazoa - 18439; Fungi - 2605; Plants - 22696; Viruses - 193; Other Eukaryotes - 5592 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      296582..298648 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111050.2NP_186833.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186833.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SGI7
      UniProtKB/TrEMBL
      A0A5S9X8C8, A0A654F394
      Conserved Domains (2) summary
      smart00221
      Location:353614
      STYKc; Protein kinase; unclassified specificity
      cl21453
      Location:353618
      PKc_like; Protein Kinases, catalytic domain