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    ATP binding microtubule motor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820851, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATP binding microtubule motor family protein
    Primary source
    TAIR:AT3G16060
    Locus tag
    AT3G16060
    See related
    Araport:AT3G16060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (5447272..5451562)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Translation machinery associated TMA7 Neighboring gene ncRNA Neighboring gene pyridoxine biosynthesis 1.2 Neighboring gene LOW protein: ATP-dependent RNA helicase-like protein Neighboring gene Zinc-binding ribosomal protein family protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Atkinesin-13A modulates cell-wall synthesis and cell expansion in Arabidopsis thaliana via the THESEUS1 pathway. Fujikura U, et al. PLoS Genet, 2014 Sep. PMID 25232944, Free PMC Article
    2. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    3. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_112476.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of cell wall organization or biogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP binding microtubule motor family protein
    NP_566534.1
    • ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G16630.2); Has 9813 Blast hits to 9533 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 4228; Fungi - 1343; Plants - 1851; Viruses - 0; Other Eukaryotes - 2387 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5447272..5451562
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112476.3 → NP_566534.1  ATP binding microtubule motor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566534.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q940Y8, Q9LW81
      UniProtKB/TrEMBL
      A0A178V575, A0A5S9XCR5, A0A7G2EL51
      Conserved Domains (1) summary
      cd01367
      Location:169 → 490
      KISc_KIF2_like; Kinesin motor domain, KIF2-like group
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q940Y8.1

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