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    zinc finger (C3HC4-type RING finger) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822354, updated on 18-Sep-2024

    Summary

    Official Full Name
    zinc finger (C3HC4-type RING finger) family protein
    Primary source
    TAIR:AT3G27330
    Locus tag
    AT3G27330
    See related
    Araport:AT3G27330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (10116674..10120645, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene Myb domain protein Neighboring gene transcriptional regulator ATRX-like protein Neighboring gene Hop-interacting protein

    General protein information

    Preferred Names
    zinc finger (C3HC4-type RING finger) family protein
    NP_189369.1
    • zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 9172 Blast hits to 9085 proteins in 2351 species: Archae - 0; Bacteria - 208; Metazoa - 7155; Fungi - 537; Plants - 665; Viruses - 17; Other Eukaryotes - 590 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10116674..10120645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113648.3NP_189369.1  zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189369.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FB54, F4IWG7
      Conserved Domains (2) summary
      cd00162
      Location:724766
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      pfam01697
      Location:276486
      Glyco_transf_92; Glycosyltransferase family 92