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    XTH31 xyloglucan endo-transglycosylase-related 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823634, updated on 18-Sep-2024

    Summary

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    Official Symbol
    XTH31
    Official Full Name
    xyloglucan endo-transglycosylase-related 8
    Primary source
    TAIR:AT3G44990
    Locus tag
    AT3G44990
    See related
    Araport:AT3G44990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtXTH31; ATXTR8; XTR8; xyloglucan endo-transglycosylase-related 8; XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31
    Summary
    Encodes a xyloglucan endotransglycosylase/hydrolase.
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    Genomic context

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    See XTH31 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (16446935..16448844, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cytochrome P450 superfamily protein Neighboring gene uncharacterized protein Neighboring gene SNF7 family protein Neighboring gene serine carboxypeptidase-like 48 Neighboring gene Ribosomal L18p/L5e family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. XTH31, encoding an in vitro XEH/XET-active enzyme, regulates aluminum sensitivity by modulating in vivo XET action, cell wall xyloglucan content, and aluminum binding capacity in Arabidopsis. Zhu XF, et al. Plant Cell, 2012 Nov. PMID 23204407, Free PMC Article
    2. Distinct catalytic capacities of two aluminium-repressed Arabidopsis thaliana xyloglucan endotransglucosylase/hydrolases, XTH15 and XTH31, heterologously produced in Pichia. Shi YZ, et al. Phytochemistry, 2015 Apr. PMID 25446234
    3. Xyloglucan Endotransglucosylase-Hydrolase17 Interacts with Xyloglucan Endotransglucosylase-Hydrolase31 to Confer Xyloglucan Endotransglucosylase Action and Affect Aluminum Sensitivity in Arabidopsis. Zhu XF, et al. Plant Physiol, 2014 Aug. PMID 24948835, Free PMC Article
    4. Group III-A XTH genes of Arabidopsis encode predominant xyloglucan endohydrolases that are dispensable for normal growth. Kaewthai N, et al. Plant Physiol, 2013 Jan. PMID 23104861, Free PMC Article
    5. NAC transcription factors ATAF1 and ANAC055 affect the heat stress response in Arabidopsis. Alshareef NO, et al. Sci Rep, 2022 Jul 4. PMID 35787631, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. catalytic capacities of two aluminium-repressed Arabidopsis thaliana xyloglucan endotransglucosylase/hydrolases, XTH15 and XTH31
      Title: Distinct catalytic capacities of two aluminium-repressed Arabidopsis thaliana xyloglucan endotransglucosylase/hydrolases, XTH15 and XTH31, heterologously produced in Pichia.
    2. XTH31 affects Al sensitivity by modulating cell wall xyloglucan content and Al binding capacity.
      Title: XTH31, encoding an in vitro XEH/XET-active enzyme, regulates aluminum sensitivity by modulating in vivo XET action, cell wall xyloglucan content, and aluminum binding capacity in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_114368.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables polysaccharide binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables xyloglucan-specific endo-beta-1,4-glucanase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables xyloglucan:xyloglucosyl transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables xyloglucan:xyloglucosyl transferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cell wall biogenesis TAS
    Traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within cell wall macromolecule catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to heat IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in xyloglucan metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    xyloglucan endo-transglycosylase-related 8
    NP_190085.1
    • xyloglucan endo-transglycosylase-related 8 (XTR8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 32 (TAIR:AT2G36870.1); Has 1950 Blast hits to 1931 proteins in 270 species: Archae - 2; Bacteria - 210; Metazoa - 0; Fungi - 320; Plants - 1353; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      16446935..16448844 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114368.3 → NP_190085.1  xyloglucan endo-transglycosylase-related 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190085.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P93046, Q9LXH6
      UniProtKB/TrEMBL
      A0A178VH62, A0A5S9XHW9
      Conserved Domains (1) summary
      cl22861
      Location:35 → 293
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P93046.2

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