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    ATG2 metallopeptidase M24 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824343, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATG2
    Official Full Name
    metallopeptidase M24 family protein
    Primary source
    TAIR:AT3G51800
    Locus tag
    AT3G51800
    See related
    Araport:AT3G51800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A. THALIANA ERBB-3 BINDING PROTEIN 1; ATEBP1; EBP1; ERBB-3 BINDING PROTEIN 1
    Summary
    putative nuclear DNA-binding protein G2p (AtG2) mRNA
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    Genomic context

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    See ATG2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (19210914..19213776, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene BCL-2-associated athanogene 4 Neighboring gene transmembrane protein G1P-related 1 Neighboring gene ncRNA Neighboring gene Stress induced protein Neighboring gene UbiA prenyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a novel cell cycle-related gene from Arabidopsis. Zhang WK, et al. J Exp Bot, 2005 Mar. PMID 15689342
    2. EBP1 nuclear accumulation negatively feeds back on FERONIA-mediated RALF1 signaling. Li C, et al. PLoS Biol, 2018 Oct. PMID 30339663, Free PMC Article
    3. AtATG genes, homologs of yeast autophagy genes, are involved in constitutive autophagy in Arabidopsis root tip cells. Inoue Y, et al. Plant Cell Physiol, 2006 Dec. PMID 17085765
    4. EBP1 regulates organ size through cell growth and proliferation in plants. Horváth BM, et al. EMBO J, 2006 Oct 18. PMID 17024182, Free PMC Article
    5. cDNA Library Screening Identifies Protein Interactors Potentially Involved in Non-Telomeric Roles of Arabidopsis Telomerase. Dokládal L, et al. Front Plant Sci, 2015. PMID 26617625, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001203131.1
    NM_115039.4
    NM_180348.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    NOT involved_in DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in auxin-activated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cell cycle G1/S phase transition IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in regulation of cell division IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of cell growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in nucleolus HDA PubMed 
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    metallopeptidase M24 family protein
    NP_001190060.1
    • ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1).
    NP_190748.1
    • ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1); Has 7405 Blast hits to 7404 proteins in 2313 species: Archae - 229; Bacteria - 4673; Metazoa - 502; Fungi - 534; Plants - 197; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink).
    NP_850679.1
    • ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1); Has 7345 Blast hits to 7344 proteins in 2293 species: Archae - 229; Bacteria - 4620; Metazoa - 502; Fungi - 534; Plants - 197; Viruses - 0; Other Eukaryotes - 1263 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19210914..19213776 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115039.4 → NP_190748.1  metallopeptidase M24 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190748.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DFJ0, F4J4J3, F4J4J5, Q96327, Q9C5I5
      UniProtKB/TrEMBL
      A0A178VB22, A0A5S9XKQ0
      Conserved Domains (1) summary
      TIGR00495
      Location:1 → 385
      crvDNA_42K; 42K curved DNA binding protein

    2. NM_180348.3 → NP_850679.1  metallopeptidase M24 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850679.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q96327
      Conserved Domains (1) summary
      TIGR00495
      Location:1 → 394
      crvDNA_42K; 42K curved DNA binding protein

    3. NM_001203131.1 → NP_001190060.1  metallopeptidase M24 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190060.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q96327
      Conserved Domains (1) summary
      TIGR00495
      Location:1 → 378
      crvDNA_42K; 42K curved DNA binding protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96327.1

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