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    Serine protease inhibitor (SERPIN) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817179, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Serine protease inhibitor (SERPIN) family protein
    Primary source
    TAIR:AT2G26390
    Locus tag
    AT2G26390
    See related
    Araport:AT2G26390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J22.6; T9J22_6
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (11228825..11230598, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene MD-2-related lipid recognition domain-containing protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene acireductone dioxygenase 3 Neighboring gene IQ-domain 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis thaliana serpins AtSRP4 and AtSRP5 negatively regulate stress-induced cell death and effector-triggered immunity induced by bacterial effector AvrRpt2. Bhattacharjee L, et al. Physiol Plant, 2017 Mar. PMID 27709637
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtSRP4 and AtSRP5 are negative regulators of stress-induced cell death and AvrRpt2-triggered immunity; however, the influence of AtSRP4 was more prominent than AtSRP5.
      Title: Arabidopsis thaliana serpins AtSRP4 and AtSRP5 negatively regulate stress-induced cell death and effector-triggered immunity induced by bacterial effector AvrRpt2.
    Submit: New GeneRIF Correction

    General gene information

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    NM_128196.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serine protease inhibitor (SERPIN) family protein
    NP_180207.1
    • Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, root, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT2G25240.1); Has 6569 Blast hits to 6505 proteins in 479 species: Archae - 66; Bacteria - 381; Metazoa - 5076; Fungi - 12; Plants - 345; Viruses - 468; Other Eukaryotes - 221 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11228825..11230598 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128196.2 → NP_180207.1  Serine protease inhibitor (SERPIN) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180207.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48706
      UniProtKB/TrEMBL
      A0A178VWC9, A0A7G2EFA5
      Conserved Domains (1) summary
      cd02043
      Location:8 → 386
      serpinP_plants; serpin family P, plant serpins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48706.1

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