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    Man1-Src1p-carboxy-terminal domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834699, updated on 18-Sep-2024

    Summary

    Official Full Name
    Man1-Src1p-carboxy-terminal domain protein
    Primary source
    TAIR:AT5G46560
    Locus tag
    AT5G46560
    See related
    Araport:AT5G46560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10E10.3; F10E10_3
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (18887987..18890517)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene P-glycoprotein 7 Neighboring gene DNA-binding bromodomain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    General gene information

    NM_124026.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in nuclear inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear periphery IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    Man1-Src1p-carboxy-terminal domain protein
    NP_199468.5
    • CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18887987..18890517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124026.6NP_199468.5  Man1-Src1p-carboxy-terminal domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199468.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDW9, A0A654G8U3, F4KHI7
      Conserved Domains (1) summary
      pfam09402
      Location:77343
      MSC; Man1-Src1p-C-terminal domain