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    Ribosomal protein L36e family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818337, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L36e family protein
    Primary source
    TAIR:AT2G37600
    Locus tag
    AT2G37600
    See related
    Araport:AT2G37600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13M22.10; F13M22_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (15774030..15775374, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene DNA binding with one finger 2.4 Neighboring gene uncharacterized protein Neighboring gene actin 1 Neighboring gene myb-like HTH transcriptional regulator family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001084548.1
    NM_129316.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    part_of cytosolic large ribosomal subunit HDA PubMed 
    located_in endoplasmic reticulum HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein L36e family protein
    NP_001078017.1
    • Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).
    NP_181296.1
    • Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 755 Blast hits to 754 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15774030..15775374 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129316.4 → NP_181296.1  Ribosomal protein L36e family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181296.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80929
      UniProtKB/TrEMBL
      A0A5S9X4U2, A0A654EZS7, A0A7G2EIC5
      Conserved Domains (1) summary
      pfam01158
      Location:7 → 101
      Ribosomal_L36e; Ribosomal protein L36e

    2. NM_001084548.1 → NP_001078017.1  Ribosomal protein L36e family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078017.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80929
      UniProtKB/TrEMBL
      A0A5S9X4U2, A0A654EZS7, A0A7G2EIC5
      Conserved Domains (1) summary
      pfam01158
      Location:7 → 101
      Ribosomal_L36e; Ribosomal protein L36e
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80929.1

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