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    lipid-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816631, updated on 18-Sep-2024

    Summary

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    Official Full Name
    lipid-binding protein
    Primary source
    TAIR:AT2G20970
    Locus tag
    AT2G20970
    See related
    Araport:AT2G20970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26H11.27; F26H11_27
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (9009867..9011067)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein, putative (DUF1279) Neighboring gene phospholipase-like protein (PEARLI 4) family protein Neighboring gene phospholipase-like protein (PEARLI 4) family protein Neighboring gene minichromosome maintenance 10 Neighboring gene synaptotagmin A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001161054.1
    NM_127666.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    lipid-binding protein
    NP_001154526.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal; EXPRESSED DURING: petal differentiation and expansion stage; Has 295 Blast hits to 269 proteins in 111 species: Archae - 15; Bacteria - 63; Metazoa - 84; Fungi - 25; Plants - 9; Viruses - 2; Other Eukaryotes - 97 (source: NCBI BLink).
    NP_179693.2
    • unknown protein; Has 204 Blast hits to 188 proteins in 80 species: Archae - 7; Bacteria - 37; Metazoa - 56; Fungi - 18; Plants - 9; Viruses - 2; Other Eukaryotes - 75 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9009867..9011067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001161054.1 → NP_001154526.1  lipid-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154526.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X016, A0A654EUS9, F4IFM3
      Conserved Domains (1) summary
      pfam01442
      Location:144 → 269
      Apolipoprotein; Apolipoprotein A1/A4/E domain

    2. NM_127666.2 → NP_179693.2  lipid-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179693.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0MEN6, Q1PF29
      Conserved Domains (1) summary
      pfam01442
      Location:144 → 267
      Apolipoprotein; Apolipoprotein A1/A4/E domain
    Nucleotide Protein
    Heading Accession and Version

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