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    BSD domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815559, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BSD domain-containing protein
    Primary source
    TAIR:AT2G10950
    Locus tag
    AT2G10950
    See related
    Araport:AT2G10950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15K19.2; F15K19_2
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (4314243..4317882, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001335361.1
    NM_001335362.1
    NM_126829.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BSD domain-containing protein
    NP_001318209.1
    • BSD domain-containing protein; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT3G49800.1); Has 187 Blast hits to 175 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 28; Fungi - 3; Plants - 134; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      4314243..4317882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335361.1 → NP_001318209.1  BSD domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WXP4, A0A654ESF4, Q9SKH9
      Conserved Domains (1) summary
      smart00751
      Location:139 → 188
      BSD; domain in transcription factors and synapse-associated proteins

    2. NM_001335362.1 → NP_001324750.1  BSD domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WXP4, A0A654ESF4, Q9SKH9
      Conserved Domains (1) summary
      smart00751
      Location:139 → 188
      BSD; domain in transcription factors and synapse-associated proteins

    3. NM_126829.4 → NP_565349.1  BSD domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565349.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WXP4, A0A654ESF4, Q9SKH9
      Conserved Domains (1) summary
      smart00751
      Location:139 → 188
      BSD; domain in transcription factors and synapse-associated proteins
    Nucleotide Protein
    Heading Accession and Version

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