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    NUDT12 nudix hydrolase homolog 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837845, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NUDT12
    Official Full Name
    nudix hydrolase homolog 12
    Primary source
    TAIR:AT1G12880
    Locus tag
    AT1G12880
    See related
    Araport:AT1G12880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    atnudt12; F13K23.14; F13K23_14; nudix hydrolase homolog 12
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    Genomic context

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    See NUDT12 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (4389678..4391344)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ncRNA Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene glyceraldehyde 3-phosphate dehydrogenase A subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_101159.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables pyrophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nudix hydrolase homolog 12
    NP_563919.1
    • nudix hydrolase homolog 12 (NUDT12); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 13 (TAIR:AT3G26690.2); Has 1294 Blast hits to 1293 proteins in 373 species: Archae - 0; Bacteria - 562; Metazoa - 265; Fungi - 111; Plants - 235; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4389678..4391344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101159.2 → NP_563919.1  nudix hydrolase homolog 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563919.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93ZY7, Q9LPW1
      UniProtKB/TrEMBL
      A0A178WEE5, A0A5S9U4C7
      Conserved Domains (1) summary
      cd04666
      Location:21 → 159
      Nudix_Hydrolase_9; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93ZY7.1

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