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    ubiquinone biosynthesis COQ9-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838497, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ubiquinone biosynthesis COQ9-like protein
    Primary source
    TAIR:AT1G19140
    Locus tag
    AT1G19140
    See related
    Araport:AT1G19140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14D16.30; F14D16_30
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (6610652..6612609, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene RmlC-like jelly roll fold protein Neighboring gene ncRNA Neighboring gene PSI type II chlorophyll a/b-binding protein (Lhca2*1) Neighboring gene F-box family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of Arabidopsis thaliana Coq9 in the CoQ Biosynthetic Pathway. Hu M, et al. Metabolites, 2023 Jun 30. PMID 37512520, Free PMC Article
    2. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101772.4
    NM_202132.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in ubiquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    ubiquinone biosynthesis COQ9-like protein
    NP_564074.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 748 Blast hits to 748 proteins in 260 species: Archae - 0; Bacteria - 218; Metazoa - 126; Fungi - 101; Plants - 39; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink).
    NP_973861.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6610652..6612609 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101772.4 → NP_564074.1  ubiquinone biosynthesis COQ9-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564074.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WF98, A0A5S9V3F6, Q9LMB2
      Conserved Domains (1) summary
      TIGR02396
      Location:92 → 276
      diverge_rpsU; rpsU-divergently transcribed protein

    2. NM_202132.2 → NP_973861.1  ubiquinone biosynthesis COQ9-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973861.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WF98, A0A5S9V3F6, F4IE14
      Conserved Domains (2) summary
      TIGR02396
      Location:92 → 277
      diverge_rpsU; rpsU-divergently transcribed protein
      pfam08511
      Location:196 → 267
      COQ9; COQ9
    Nucleotide Protein
    Heading Accession and Version

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