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    ABCG21 ABC-2 type transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822149, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCG21
    Official Full Name
    ABC-2 type transporter family protein
    Primary source
    TAIR:AT3G25620
    Locus tag
    AT3G25620
    See related
    Araport:AT3G25620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATP-binding cassette G21; T5M7.11
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    Genomic context

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    See ABCG21 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (9316074..9319660, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Calcium-binding EF-hand family protein Neighboring gene ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein Neighboring gene pseudo Neighboring gene MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional relationship of AtABCG21 and AtABCG22 in stomatal regulation. Kuromori T, et al. Sci Rep, 2017 Oct 2. PMID 28970576, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Functional relationship of ABCG21 and ABCG22 in stomatal regulation has been described.
      Title: Functional relationship of AtABCG21 and AtABCG22 in stomatal regulation.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_113460.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ABC-2 type transporter family protein
    NP_001189973.1
    • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1).
    NP_189190.2
    • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1); Has 397244 Blast hits to 359819 proteins in 4062 species: Archae - 7097; Bacteria - 312965; Metazoa - 9004; Fungi - 6846; Plants - 5563; Viruses - 13; Other Eukaryotes - 55756 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9316074..9319660 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203044.2 → NP_001189973.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189973.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7XA72, Q9LI82
      UniProtKB/TrEMBL
      A0A178V9A5
      Conserved Domains (3) summary
      PLN03211
      Location:43 → 670
      PLN03211; ABC transporter G-25; Provisional
      pfam01061
      Location:416 → 615
      ABC2_membrane; ABC-2 type transporter
      cl21455
      Location:89 → 304
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. NM_113460.3 → NP_189190.2  ABC-2 type transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189190.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7XA72
      Conserved Domains (2) summary
      cd03213
      Location:65 → 304
      ABCG_EPDR; Eye pigment and drug resistance transporter subfamily G of the ATP-binding cassette superfamily
      TIGR03864
      Location:85 → 314
      PQQ_ABC_ATP; ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7XA72.2

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