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    PAM68 PAM68-like protein (DUF3464) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 2745715, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PAM68
    Official Full Name
    PAM68-like protein (DUF3464)
    Primary source
    TAIR:AT4G19100
    Locus tag
    AT4G19100
    See related
    Araport:AT4G19100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    photosynthesis affected mutant 68
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    Genomic context

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    See PAM68 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (10453415..10454515)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF594) Neighboring gene ncRNA Neighboring gene transmembrane protein, putative (DUF594) Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Replication factor-A protein 1-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis thylakoid protein PAM68 is required for efficient D1 biogenesis and photosystem II assembly. Armbruster U, et al. Plant Cell, 2010 Oct. PMID 20923938, Free PMC Article
    2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PAM68 is a PSII assembly factor that acts at the level of D1 maturation and stability.
      Title: The Arabidopsis thylakoid protein PAM68 is required for efficient D1 biogenesis and photosystem II assembly.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001341324.1
    NM_202842.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within photosystem II assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    PAM68-like protein (DUF3464)
    NP_974571.1
    • Protein of unknown function (DUF3464); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3464 (InterPro:IPR021855); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3464) (TAIR:AT5G52780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10453415..10454515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202842.3 → NP_974571.1  PAM68-like protein (DUF3464) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974571.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49668
      UniProtKB/TrEMBL
      A0A178V419, A0A5S9XU90, A0A654FQU6
      Conserved Domains (1) summary
      pfam11947
      Location:107 → 208
      DUF3464; Protein of unknown function (DUF3464)

    2. NM_001341324.1 → NP_001329651.1  PAM68-like protein (DUF3464) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8D1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O49668.1

    Gene LinkOut

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