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    Tapetum specific protein TAP35/TAP44 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827790, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Tapetum specific protein TAP35/TAP44
    Primary source
    TAIR:AT4G20420
    Locus tag
    AT4G20420
    See related
    Araport:AT4G20420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9F13.70; F9F13_70
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (11016970..11017623)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene LSD1 zinc finger family protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene JUMONJI 14 Neighboring gene gamma-soluble NSF attachment protein Neighboring gene Subtilase family protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene small nuclear ribonucleoprotein associated protein B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_118161.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Tapetum specific protein TAP35/TAP44
    NP_193775.1
    • Tapetum specific protein TAP35/TAP44; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tapetum specific TAP35TAP44 (InterPro:IPR009891); BEST Arabidopsis thaliana protein match is: Tapetum specific protein TAP35/TAP44 (TAIR:AT5G44540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11016970..11017623
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118161.2 → NP_193775.1  Tapetum specific protein TAP35/TAP44 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193775.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUI7, A0A654FR71, Q9SUN7
      Conserved Domains (1) summary
      pfam07265
      Location:3 → 142
      TAP35_44; Tapetum specific protein TAP35/TAP44
    Nucleotide Protein
    Heading Accession and Version

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