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    RHS16 root hair specific 16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829039, updated on 18-Sep-2024

    Summary

    Official Symbol
    RHS16
    Official Full Name
    root hair specific 16
    Primary source
    TAIR:AT4G29180
    Locus tag
    AT4G29180
    See related
    Araport:AT4G29180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19B15.210; F19B15_210; root hair specific 16
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    Genomic context

    See RHS16 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (14385471..14389775)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SNF7 family protein Neighboring gene Mnd1 family protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene Beta-galactosidase related protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_119062.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    root hair specific 16
    NP_001190865.1
    • root hair specific 16 (RHS16); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G29450.1).
    NP_194647.2
    • root hair specific 16 (RHS16); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT4G29450.1); Has 136747 Blast hits to 120807 proteins in 4421 species: Archae - 131; Bacteria - 13766; Metazoa - 43367; Fungi - 9914; Plants - 51055; Viruses - 402; Other Eukaryotes - 18112 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14385471..14389775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203936.2NP_001190865.1  root hair specific 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190865.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0LGR6, Q9SZE6
      UniProtKB/TrEMBL
      A0A178V2M3, A0A5S9XXM9
      Conserved Domains (3) summary
      PLN00113
      Location:400478
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd14066
      Location:573852
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam12819
      Location:31358
      Malectin_like; Carbohydrate-binding protein of the ER
    2. NM_001341960.1NP_001328257.1  root hair specific 16 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4I7, A0A1P8B426, A0A384LFC7, A0A5S9XXM9
    3. NM_119062.3NP_194647.2  root hair specific 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194647.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XXM9, F4JMW3
      Conserved Domains (2) summary
      cd14066
      Location:571850
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam12819
      Location:31358
      Malectin_like; Carbohydrate-binding protein of the ER