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    GAUT3 galacturonosyltransferase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829984, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GAUT3
    Official Full Name
    galacturonosyltransferase 3
    Primary source
    TAIR:AT4G38270
    Locus tag
    AT4G38270
    See related
    Araport:AT4G38270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22I13.40; F22I13_40; galacturonosyltransferase 3
    Summary
    Encodes a protein with putative galacturonosyltransferase activity.
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    Genomic context

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    See GAUT3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (17938372..17941717)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ncRNA Neighboring gene transport/golgi organization-like protein (DUF833) Neighboring gene integral membrane hemolysin-III-like protein Neighboring gene hemolysin-III related integral membrane protein Neighboring gene glycosyl hydrolase family 10 protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase. Sterling JD, et al. Proc Natl Acad Sci U S A, 2006 Mar 28. PMID 16540543, Free PMC Article
    2. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
    3. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
    4. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
    5. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001204023.1
    NM_119989.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pectin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi medial cisterna HDA PubMed 
    located_in endosome HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    galacturonosyltransferase 3
    NP_001190952.1
    • galacturonosyltransferase 3 (GAUT3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1).
    NP_195540.2
    • galacturonosyltransferase 3 (GAUT3); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 1 (TAIR:AT3G61130.1); Has 1550 Blast hits to 1544 proteins in 293 species: Archae - 0; Bacteria - 563; Metazoa - 141; Fungi - 0; Plants - 820; Viruses - 2; Other Eukaryotes - 24 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17938372..17941717
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119989.5 → NP_195540.2  galacturonosyltransferase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195540.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JTM1, Q0WQD2, Q9SVF8
      UniProtKB/TrEMBL
      A0A5S9XZP8, A0A654FWW8, W8Q6G8
      Conserved Domains (1) summary
      PLN02910
      Location:36 → 680
      PLN02910; polygalacturonate 4-alpha-galacturonosyltransferase

    2. NM_001204023.1 → NP_001190952.1  galacturonosyltransferase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190952.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZP8, F4JTM2
      Conserved Domains (2) summary
      cd06429
      Location:365 → 662
      GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
      PLN02910
      Location:36 → 676
      PLN02910; polygalacturonate 4-alpha-galacturonosyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WQD2.2

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