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    diphthamide synthesis DPH2 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825132, updated on 18-Sep-2024

    Summary

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    Official Full Name
    diphthamide synthesis DPH2 family protein
    Primary source
    TAIR:AT3G59630
    Locus tag
    AT3G59630
    See related
    Araport:AT3G59630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (22025003..22028523, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box family protein / jacalin lectin family protein Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene glycine-rich protein Neighboring gene mitochondrial ribosomal protein L51/S25/CI-B8 family protein Neighboring gene C2 domain-containing protein / GRAM domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115825.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 2-(3-amino-3-carboxypropyl)histidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein histidyl modification to diphthamide IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    diphthamide synthesis DPH2 family protein
    NP_191522.1
    • diphthamide synthesis DPH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728), Diphthamide synthesis, DHP2 (InterPro:IPR010014); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT5G62030.1); Has 995 Blast hits to 948 proteins in 287 species: Archae - 127; Bacteria - 0; Metazoa - 243; Fungi - 308; Plants - 94; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22025003..22028523 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339991.1 → NP_001327300.1  diphthamide synthesis DPH2 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG74, A0A654FJA0, Q9M1A5
      Conserved Domains (1) summary
      TIGR00322
      Location:9 → 360
      diphth2_R; diphthamide biosynthesis enzyme Dph1/Dph2 domain

    2. NM_001339992.1 → NP_001327299.1  diphthamide synthesis DPH2 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG74, A0A1I9LRW3

    3. NM_115825.5 → NP_191522.1  diphthamide synthesis DPH2 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191522.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG74, A0A654FJA0, Q9M1A5
      Conserved Domains (1) summary
      TIGR00322
      Location:9 → 360
      diphth2_R; diphthamide biosynthesis enzyme Dph1/Dph2 domain
    Nucleotide Protein
    Heading Accession and Version

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