U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    prolyl oligopeptidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832493, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    prolyl oligopeptidase family protein
    Primary source
    TAIR:AT5G24260
    Locus tag
    AT5G24260
    See related
    Araport:AT5G24260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MOP9.8; MOP9_8
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (8234684..8238294, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Lipase class 3-related protein Neighboring gene Lipase class 3-related protein Neighboring gene phosphatidylinositol 4-kinase gamma-like protein Neighboring gene Calcium-binding EF-hand family protein Neighboring gene En/Spm-like transposon Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001343857.1
    NM_001343858.1
    NM_001343859.1
    NM_001343860.1
    NM_122332.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    prolyl oligopeptidase family protein
    NP_197814.1
    • prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8234684..8238294 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122332.4 → NP_197814.1  prolyl oligopeptidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197814.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y948, A0A654G477, Q9FNF6
      Conserved Domains (2) summary
      pfam00326
      Location:544 → 746
      Peptidase_S9; Prolyl oligopeptidase family
      pfam00930
      Location:103 → 458
      DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

    2. NM_001343857.1 → NP_001332760.1  prolyl oligopeptidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y948, A0A654G477, Q9FNF6
      Conserved Domains (2) summary
      pfam00326
      Location:544 → 746
      Peptidase_S9; Prolyl oligopeptidase family
      pfam00930
      Location:103 → 458
      DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

    3. NM_001343858.1 → NP_001332761.1  prolyl oligopeptidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y948, A0A654G477, Q9FNF6
      Conserved Domains (2) summary
      pfam00326
      Location:544 → 746
      Peptidase_S9; Prolyl oligopeptidase family
      pfam00930
      Location:103 → 458
      DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

    4. NM_001343859.1 → NP_001332762.1  prolyl oligopeptidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y948, A0A654G477, Q9FNF6
      Conserved Domains (2) summary
      pfam00326
      Location:544 → 746
      Peptidase_S9; Prolyl oligopeptidase family
      pfam00930
      Location:103 → 458
      DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region

    5. NM_001343860.1 → NP_001332763.1  prolyl oligopeptidase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1R7T3L2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools