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    SGP1 Ras-related small GTP-binding family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835574, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SGP1
    Official Full Name
    Ras-related small GTP-binding family protein
    Primary source
    TAIR:AT5G54840
    Locus tag
    AT5G54840
    See related
    Araport:AT5G54840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSGP1; MBG8.10; MBG8_10
    Summary
    Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.
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    Genomic context

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    See SGP1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (22276343..22278423, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tryptophan synthase beta-subunit 1 Neighboring gene F-box/RNI-like superfamily protein Neighboring gene DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein Neighboring gene hexon Neighboring gene Pollen Ole e 1 allergen and extensin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis monomeric G-proteins, markers of early and late events in cell differentiation. Bedhomme M, et al. Int J Dev Biol, 2009. PMID 19123141
    2. AtSGP1, AtSGP2 and MAP4K alpha are nucleolar plant proteins that can complement fission yeast mutants lacking a functional SIN pathway. Champion A, et al. J Cell Sci, 2004 Aug 15. PMID 15292395
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124865.4
    NM_203204.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ras-related small GTP-binding family protein
    NP_200295.1
    • SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_974933.1
    • SGP1; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G21700.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22276343..22278423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345101.1 → NP_001331825.1  Ras-related small GTP-binding family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BF33
      Conserved Domains (1) summary
      cl38936
      Location:103 → 204
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. NM_124865.4 → NP_200295.1  Ras-related small GTP-binding family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200295.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAS3, A0A5S9YE76, Q9SUJ6
      Conserved Domains (1) summary
      cd04128
      Location:103 → 283
      Spg1; Septum-promoting GTPase (Spg1)

    3. NM_203204.3 → NP_974933.1  Ras-related small GTP-binding family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974933.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A2RVU6
      Conserved Domains (1) summary
      cl38936
      Location:103 → 204
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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