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    BT4 BTB and TAZ domain protein 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836884, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BT4
    Official Full Name
    BTB and TAZ domain protein 4
    Primary source
    TAIR:AT5G67480
    Locus tag
    AT5G67480
    See related
    Araport:AT5G67480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATBT4; BTB and TAZ domain protein 4; K9I9.4; K9I9_4
    Summary
    BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.
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    Genomic context

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    See BT4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (26930539..26933352, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene zinc-finger protein 1 Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene tRNA-Met Neighboring gene formin homolog 6 Neighboring gene ncRNA Neighboring gene succinate dehydrogenase assembly factor Neighboring gene voltage dependent anion channel 2 Neighboring gene Translation protein SH3-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ethylene Response Factor ERF11 Activates BT4 Transcription to Regulate Immunity to Pseudomonas syringae. Zheng X, et al. Plant Physiol, 2019 Jun. PMID 30926656, Free PMC Article
    2. BTB and TAZ domain scaffold proteins perform a crucial function in Arabidopsis development. Robert HS, et al. Plant J, 2009 Apr. PMID 19054356
    3. The transactivation domain within cysteine/histidine-rich region 1 of CBP comprises two novel zinc-binding modules. Newton AL, et al. J Biol Chem, 2000 May 19. PMID 10748221
    4. A novel family of Ca2+/calmodulin-binding proteins involved in transcriptional regulation: interaction with fsh/Ring3 class transcription activators. Du L, et al. Plant Mol Biol, 2004 Mar. PMID 15316289
    5. Global analysis of della direct targets in early gibberellin signaling in Arabidopsis. Zentella R, et al. Plant Cell, 2007 Oct. PMID 17933900, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Ethylene Response Factor ERF11 Activates BT4 Transcription to Regulate Immunity to Pseudomonas syringae.
      Title: Ethylene Response Factor ERF11 Activates BT4 Transcription to Regulate Immunity to Pseudomonas syringae.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001345832.1
    NM_126148.4
    NM_203278.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to gibberellin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to hydrogen peroxide IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to jasmonic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salicylic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    BTB and TAZ domain protein 4
    NP_201549.1
    • BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_975007.1
    • BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26930539..26933352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126148.4 → NP_201549.1  BTB and TAZ domain protein 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201549.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3E848, Q9FJX5
      UniProtKB/TrEMBL
      A0A178U8M0, A0A5S9YI48, A0A7G2FJH2
      Conserved Domains (3) summary
      smart00551
      Location:237 → 330
      ZnF_TAZ; TAZ zinc finger, present in p300 and CBP
      cd18313
      Location:59 → 160
      BTB_POZ_BT; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Arabidopsis thaliana BTB/POZ and TAZ domain-containing proteins, BT1-5
      cl28903
      Location:161 → 216
      BACK; BACK (BTB and C-terminal Kelch) domain

    2. NM_001345832.1 → NP_001330470.1  BTB and TAZ domain protein 4 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3E848, Q9FJX5
      UniProtKB/TrEMBL
      A0A178U8M0, A0A5S9YI48, A0A7G2FJH2
      Conserved Domains (3) summary
      smart00551
      Location:237 → 330
      ZnF_TAZ; TAZ zinc finger, present in p300 and CBP
      cd18313
      Location:59 → 160
      BTB_POZ_BT; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Arabidopsis thaliana BTB/POZ and TAZ domain-containing proteins, BT1-5
      cl28903
      Location:161 → 216
      BACK; BACK (BTB and C-terminal Kelch) domain

    3. NM_203278.2 → NP_975007.1  BTB and TAZ domain protein 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_975007.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U9L5
      Conserved Domains (4) summary
      smart00225
      Location:72 → 171
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00551
      Location:248 → 341
      ZnF_TAZ; TAZ zinc finger, present in p300 and CBP
      cd14734
      Location:172 → 232
      SPOP_C; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl02518
      Location:62 → 167
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FJX5.1

    Gene LinkOut

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