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    RGL3 RGA-like protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831615, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RGL3
    Official Full Name
    RGA-like protein 3
    Primary source
    TAIR:AT5G17490
    Locus tag
    AT5G17490
    See related
    Araport:AT5G17490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRGL3; K3M16.60; K3M16_60; RGA-like protein 3
    Summary
    DELLA subfamily member involved in GA signal transduction
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    Genomic context

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    See RGL3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (5763989..5766246, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene EF hand calcium-binding protein family Neighboring gene pollen calcium-binding protein 1 Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene mediator of RNA polymerase II transcription subunit-like protein Neighboring gene root cap 1 (RCP1)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis DELLA RGA-LIKE3 is a direct target of MYC2 and modulates jasmonate signaling responses. Wild M, et al. Plant Cell, 2012 Aug. PMID 22892320, Free PMC Article
    2. Arabidopsis RGL1 encodes a negative regulator of gibberellin responses. Wen CK, et al. Plant Cell, 2002 Jan. PMID 11826301, Free PMC Article
    3. PIF3 is involved in the primary root growth inhibition of Arabidopsis induced by nitric oxide in the light. Bai S, et al. Mol Plant, 2014 Apr. PMID 24157606, Free PMC Article
    4. SMAX1 interacts with DELLA protein to inhibit seed germination under weak light conditions via gibberellin biosynthesis in Arabidopsis. Xu P, et al. Cell Rep, 2023 Jul 25. PMID 37405917
    5. Identification of conserved tyrosine residues important for gibberellin sensitivity of Arabidopsis RGL2 protein. Hussain A, et al. Planta, 2007 Jul. PMID 17333251

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PIF3 lies downstream of PHYB and RGL3, and plays an important role in the inhibitory effect of NO on root growth of Arabidopsis seedlings in light.
      Title: PIF3 is involved in the primary root growth inhibition of Arabidopsis induced by nitric oxide in the light.
    2. MYC2 regulates RGL3 expression through a direct association with its promotor. RGL3 positively regulates jasmonate-mediated disease resistance.
      Title: The Arabidopsis DELLA RGA-LIKE3 is a direct target of MYC2 and modulates jasmonate signaling responses.
    3. Data documented that Lys-29 of ubiquitin is the major site for ubiquitin chain formation to mediate DELLA protein degradation that also required protein Ser/Thr dephosphorylation activity. The LZ domain is essential for both their stability and activity.
      Title: Biochemical insights on degradation of Arabidopsis DELLA proteins gained from a cell-free assay system.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_121755.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within gibberellic acid mediated signaling pathway TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of seed maturation IGI
    Inferred from Genetic Interaction
    more info
    		  
    acts_upstream_of_or_within response to gibberellin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to gibberellin ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within seed maturation IMP
    Inferred from Mutant Phenotype
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RGA-like protein 3
    NP_197251.1
    • RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5763989..5766246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121755.3 → NP_197251.1  RGA-like protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197251.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LF53
      UniProtKB/TrEMBL
      A0A654G1V1
      Conserved Domains (2) summary
      pfam03514
      Location:157 → 516
      GRAS; GRAS domain family
      pfam12041
      Location:34 → 100
      DELLA; Transcriptional regulator DELLA protein N terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LF53.1

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