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    PIP5K5 phosphatidylinositol- 4-phosphate 5-kinase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818720, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PIP5K5
    Official Full Name
    phosphatidylinositol- 4-phosphate 5-kinase 5
    Primary source
    TAIR:AT2G41210
    Locus tag
    AT2G41210
    See related
    Araport:AT2G41210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    phosphatidylinositol- 4-phosphate 5-kinase 5; T3K9.2; T3K9_2
    Summary
    Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.
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    Genomic context

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    See PIP5K5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (17173374..17176866)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene uncharacterized protein Neighboring gene glutamate synthase 2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Type B phosphatidylinositol-4-phosphate 5-kinases mediate Arabidopsis and Nicotiana tabacum pollen tube growth by regulating apical pectin secretion. Ischebeck T, et al. Plant Cell, 2008 Dec. PMID 19060112, Free PMC Article
    2. The Arabidopsis Phosphatidylinositol Phosphate 5-Kinase PIP5K3 is a key regulator of root hair tip growth. Kusano H, et al. Plant Cell, 2008 Feb. PMID 18281506, Free PMC Article
    3. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphatidylinositol metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within plant-type cell wall modification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen germination IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube growth IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in pollen tube IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol- 4-phosphate 5-kinase 5
    NP_181654.1
    • phosphatidylinositol- 4-phosphate 5-kinase 5 (PIP5K5); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidyl inositol monophosphate 5 kinase 4 (TAIR:AT3G56960.1); Has 28370 Blast hits to 7831 proteins in 606 species: Archae - 2; Bacteria - 4383; Metazoa - 4412; Fungi - 450; Plants - 2408; Viruses - 2; Other Eukaryotes - 16713 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17173374..17176866
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129686.2 → NP_181654.1  phosphatidylinositol- 4-phosphate 5-kinase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181654.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SLG9
      UniProtKB/TrEMBL
      A0A178VQ77, A0A7G2EJ51
      Conserved Domains (1) summary
      PLN03185
      Location:66 → 768
      PLN03185; phosphatidylinositol phosphate kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SLG9.1

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