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    transmembrane receptor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817773, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane receptor
    Primary source
    TAIR:AT2G32140
    Locus tag
    AT2G32140
    See related
    Araport:AT2G32140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22D22.11; F22D22_11
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (13655627..13657369, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene heat-shock protein 70T-2 Neighboring gene intracellular protein transporter, putative (DUF641) Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overexpression of the TIR-X gene results in a dwarf phenotype and activation of defense-related gene expression in Arabidopsis thaliana. Kato H, et al. J Plant Physiol, 2014 Mar 15. PMID 24594389
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. At2g32140 encodes a protein involved in the plant defense response.
      Title: Overexpression of the TIR-X gene results in a dwarf phenotype and activation of defense-related gene expression in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_128773.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane receptor
    NP_180773.3
    • transmembrane receptors; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: phloem protein 2 A5 (TAIR:AT1G65390.1); Has 1651 Blast hits to 1572 proteins in 54 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 1639; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13655627..13657369 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128773.6 → NP_180773.3  transmembrane receptor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180773.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4ISS7
      Conserved Domains (2) summary
      pfam01582
      Location:22 → 188
      TIR; TIR domain
      pfam04859
      Location:258 → 303
      DUF641; Plant protein of unknown function (DUF641)
    Nucleotide Protein
    Heading Accession and Version

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