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    MYB3 myb domain protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838870, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB3
    Official Full Name
    myb domain protein 3
    Primary source
    TAIR:AT1G22640
    Locus tag
    AT1G22640
    See related
    Araport:AT1G22640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3; ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3; ATMYB3; myb domain protein 3; T22J18.19; T22J18_19; TRANSCRIPTION FACTOR MYB3
    Summary
    MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression
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    Genomic context

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    See MYB3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (8006064..8007465)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene Phosphoinositide phosphatase family protein Neighboring gene SSUH2-like protein Neighboring gene Plant neutral invertase family protein Neighboring gene Polynucleotide adenylyltransferase family protein Neighboring gene Protease-associated (PA) RING/U-box zinc finger family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The CmMYB3 transcription factors isolated from the Chrysanthemum morifolium regulate flavonol biosynthesis in Arabidopsis thaliana. Yang F, et al. Plant Cell Rep, 2023 Apr. PMID 36840758
    2. Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis. Cheong YH, et al. Plant Physiol, 2002 Jun. PMID 12068110, Free PMC Article
    3. LNK1 and LNK2 Corepressors Interact with the MYB3 Transcription Factor in Phenylpropanoid Biosynthesis. Zhou M, et al. Plant Physiol, 2017 Jul. PMID 28483877, Free PMC Article
    4. The C-terminal region (640-967) of Arabidopsis CPL1 interacts with the abiotic stress- and ABA-responsive transcription factors. Bang WY, et al. Biochem Biophys Res Commun, 2008 Aug 8. PMID 18541146
    5. Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. Sparks EE, et al. Dev Cell, 2016 Dec 5. PMID 27923776, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The CmMYB3 transcription factors isolated from the Chrysanthemum morifolium regulate flavonol biosynthesis in Arabidopsis thaliana.
      Title: The CmMYB3 transcription factors isolated from the Chrysanthemum morifolium regulate flavonol biosynthesis in Arabidopsis thaliana.
    2. LNK1 and LNK2 act as transcriptional corepressors necessary for expression of the phenylpropanoids biosynthesis gene C4H through recruitment to its promoter via interaction with MYB3.
      Title: LNK1 and LNK2 Corepressors Interact with the MYB3 Transcription Factor in Phenylpropanoid Biosynthesis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001332555.1
    NM_102111.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cinnamic acid biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of metabolic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 3
    NP_564176.2
    • myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8006064..8007465
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332554.1 → NP_001322404.1  myb domain protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATW9
      Conserved Domains (1) summary
      PLN03212
      Location:16 → 55
      PLN03212; Transcription repressor MYB5; Provisional

    2. NM_102111.4 → NP_564176.2  myb domain protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564176.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S7Y2, Q9S9K9
      UniProtKB/TrEMBL
      A0A178WFN1, A0A5S9VLS1
      Conserved Domains (1) summary
      PLN03091
      Location:1 → 131
      PLN03091; hypothetical protein; Provisional

    3. NM_001332555.1 → NP_001322405.1  myb domain protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATY3
      Conserved Domains (1) summary
      PLN03091
      Location:1 → 74
      PLN03091; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S9K9.1

    Gene LinkOut

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