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    EXS (ERD1/XPR1/SYG1) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837965, updated on 18-Sep-2024

    Summary

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    Official Full Name
    EXS (ERD1/XPR1/SYG1) family protein
    Primary source
    TAIR:AT1G14040
    Locus tag
    AT1G14040
    See related
    Araport:AT1G14040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7A19.13; F7A19_13; PHO1 homolog 3; PHO1;H3
    Summary
    Encodes a PHO1 homologue that is upregulated in response to Zn deficiency and is involved in Pi homeostasis in response to Zn deficiency.
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (4810115..4814724)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene O-fucosyltransferase family protein Neighboring gene ncRNA Neighboring gene Rubisco methyltransferase family protein Neighboring gene GCK domain-containing protein Neighboring gene GCK domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coordination between zinc and phosphate homeostasis involves the transcription factor PHR1, the phosphate exporter PHO1, and its homologue PHO1;H3 in Arabidopsis. Khan GA, et al. J Exp Bot, 2014 Mar. PMID 24420568, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PHO1;H3 restricts root-to-shoot Pi transfer requiring PHO1 function for Pi homeostasis in response to Zn deficiency. [PHO1;H3]
      Title: Coordination between zinc and phosphate homeostasis involves the transcription factor PHR1, the phosphate exporter PHO1, and its homologue PHO1;H3 in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_101270.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular zinc ion homeostasis IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphate ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  
    located_in trans-Golgi network IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    EXS (ERD1/XPR1/SYG1) family protein
    NP_172857.2
    • EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT2G03240.1); Has 1168 Blast hits to 1094 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 396; Plants - 362; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4810115..4814724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101270.3 → NP_172857.2  EXS (ERD1/XPR1/SYG1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172857.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6R8G7, Q9LMF4, Q9XI83
      UniProtKB/TrEMBL
      A0A5S9UBK3
      Conserved Domains (2) summary
      pfam03105
      Location:1 → 361
      SPX; SPX domain
      pfam03124
      Location:450 → 787
      EXS; EXS family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6R8G7.2

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